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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002929
species: Centaurea maculosa
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCTGGCTCCCTGTATGCCA

miRNA*
 GCGTATGAGGAGCCAAGCATA

mismatches: 2
bulges: 0
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pre-miRNA
 GTGTAAGTATATGCCTGGCTCCCTGTATGCCATTTTCAGAGCCCATCGGTATTTCCAATGGCCTCCGTGGATGGCGTATGAGGAGCCAAGCATATTCCAC
AT

dot-bracket secondary structure
(((.....((((((.(((((((.((((((((((((...(((.((((.((.....)).)))).)))...)))))))))))).))))))).))))))..)))
..


SIMILARITIES
miRBase ptc-MIR160c: 2e-24

PMRD ptc-miR160c: 2e-24

microPC miR160: 1e-40		UniProt no hits

RFAM mir-160: 1e-19		most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046058)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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