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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST001877
species: Parthenium argentatum
miRNA family: miR319b
source: miRNEST

Taxonomy by NCBI:
Parthenium argentatum Parthenium Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGAGCTTTCTTCGGTCCACTC

miRNA*
 TTGGACTGAAGGGAGCTCCCT

mismatches: 4
bulges: 0
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pre-miRNA
 ATAAGAGAAAGAGAGCTTTCTTCGGTCCACTCACGGGTTACGATAAGATATCAATTAGCTGCCGACTCATTCACCCAAATACTAGGCCAAAATCTGTTTA
TAGTGCTTAGTAAATGATTGAATGATGCGGGAGACAAATTGGATCTTAAGTGTCCTGTATTTGGACTGAAGGGAGCTCCCTTATATTTC

dot-bracket secondary structure
........(((.(((((((((((((((((...(((((.(((..((((((.((((((..((.(((..(((((((..((..((((((((......(((....
))).))))))))..))..)))))))..))).))...)))))))))))).))).)))))...))))))))))))))))).))).......


SIMILARITIES
miRBase vvi-MIR319c: 3e-24

PMRD vvi-miR319c: 3e-24

microPC miR319: 5e-23		UniProt no hits

RFAM MIR159: 6e-23		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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