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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003003
species: Artemisia annua
miRNA family: MIR172
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAATCCTGATGATGCTGCAGC

miRNA*
 TGCTTAATAATTGATGATTCAG

mismatches: 5
bulges: 1
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pre-miRNA
 GGGTGAGTCAAATATTGAATCTTTGATGTGGGAATCCTGATGATGCTGCAGCACTCTTAGCATAGATTTGGTGTAGAAGAGGTCCATTGCTATTAACATT
GTTTTCATATGAAGCTACAGACAAATCAGTTACTCCTTCCATTGTGCTGCTTAATAATTGATGATTCAGTGAGTTGAAGTTCGGTGGATCCATCACA

dot-bracket secondary structure
..((((......(((((((.(((((((....(((((.((((.((...(((((((.......((.((...((.((((..((.(((....(((.........
............)))....)))...))..)))).)).)).)).)))))))...)).))))..))))).....))))))))))))))......)))).


SIMILARITIES
miRBase vvi-MIR172c: 0.000000003

PMRD vvi-miR172c: 0.000000003

microPC miR172: 0.0006		UniProt no hits

RFAM mir-172: 0.00000005		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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