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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002898
species: Carthamus tinctorius
miRNA family: MIRf1351
source: miRNEST

Taxonomy by NCBI:
Carthamus tinctorius Carthamus Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTGACAGAAGAGAGTGAGCA

miRNA*
 CTCACTTCTCTTGCTGTCAGCTA

mismatches: 0
bulges: 2
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pre-miRNA
 AGAAAGAAAGCTGACAGAAGAGAGTGAGCATATGCAAAGCAATTGTATAGAAAAACTATACGTTTGTTGGAATTATGCGTGTGCTCACTTCTCTTGCTGT
CAGCTACCCTCA

dot-bracket secondary structure
........((((((((((((((((((((((((((((.(((((.(((((((.....))))))).))))).......))))))))))))).)))))).))))
))))).......


SIMILARITIES
miRBase zma-MIR156c: 0.0000003

PMRD zma-miR156c: 0.0000003

microPC miR156: 3e-44		UniProt no hits

RFAM mir-156: 0.0004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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