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Species belonging to selected taxon:
Bicyclus anynana
,
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Danio rerio
,
Ciona intestinalis
,
Rattus norvegicus
,
Drosophila melanogaster
,
Xenopus laevis
,
Oryzias latipes
,
Gallus gallus
,
Salmo salar
,
Caenorhabditis elegans
,
Canis lupus familiaris
,
Ictalurus punctatus
,
Ovis aries
,
Branchiostoma floridae
,
Bombyx mori
,
Aedes aegypti
,
Oncorhynchus mykiss
,
Gasterosteus aculeatus
,
Pimephales promelas
,
Aplysia californica
,
Lottia gigantea
,
Gadus morhua
,
Alvinella pompejana
,
Schistosoma mansoni
,
Ixodes scapularis
,
Macaca fascicularis
,
Litopenaeus vannamei
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Paracentrotus lividus
,
Ictalurus furcatus
,
Lepeophtheirus salmonis
,
Homo sapiens
,
Acyrthosiphon pisum
,
Culex quinquefasciatus
,
Saccoglossus kowalevskii
,
Anopheles gambiae
,
Dendroctonus ponderosae
,
Daphnia pulex
,
Nasonia vitripennis
,
Strongylocentrotus purpuratus
,
Petromyzon marinus
,
Drosophila simulans
,
Oreochromis niloticus
,
Molgula tectiformis
,
Schistosoma japonicum
,
Helobdella robusta
,
Petrolisthes cinctipes
,
Taeniopygia guttata
,
Aphis gossypii
,
Ciona savignyi
,
Ancylostoma caninum
,
Tetranychus urticae
,
Glossina morsitans morsitans
,
Peromyscus maniculatus bairdii
,
Fundulus heteroclitus
,
Choristoneura fumiferana
,
Sparus aurata
,
Spodoptera frugiperda
,
Halocynthia roretzi
,
Heliothis virescens
,
Crassostrea gigas
,
Patiria pectinifera
,
Ascaris suum
,
Dicentrarchus labrax
,
Biomphalaria glabrata
,
Heterorhabditis bacteriophora
,
Rhipicephalus microplus
,
Brachionus plicatilis
,
Pongo abelii
,
Locusta migratoria
,
Phlebotomus papatasi
,
Mytilus californianus
,
Penaeus monodon
,
Ursus americanus
,
Drosophila sechellia
,
Drosophila auraria
,
Artemia franciscana
,
Pristionchus pacificus
,
Nilaparvata lugens
,
Equus caballus
,
Dissostichus mawsoni
,
Osmerus mordax
,
Euprymna scolopes
,
Antheraea assama
,
Drosophila pseudoobscura
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Anoplopoma fimbria
,
Cyprinus carpio
,
Teleopsis dalmanni
,
Lutzomyia longipalpis
,
Caenorhabditis japonica
,
Esox lucius
,
Squalus acanthias
,
Caligus rogercresseyi
,
Leucoraja erinacea
,
Taenia solium
,
Nasonia giraulti
,
Homarus americanus
,
Caenorhabditis brenneri
,
Bombus terrestris
,
Rana catesbeiana
,
Myzus persicae
,
Strongyloides ratti
,
Drosophila willistoni
,
Brugia malayi
,
Takifugu rubripes
,
Cynops pyrrhogaster
,
Trichinella spiralis
,
Meloidogyne hapla
,
Heterodera glycines
,
Eptatretus burgeri
,
Sebastes caurinus
,
Drosophila ananassae
,
Solenopsis invicta
,
Drosophila virilis
,
Drosophila erecta
,
Misgurnus anguillicaudatus
,
Perca flavescens
,
Paralabidochromis chilotes
,
Drosophila grimshawi
,
Ceratitis capitata
,
Hippoglossus hippoglossus
,
Spodoptera littoralis
,
Peregrinus maidis
,
Ambystoma tigrinum tigrinum
,
Meloidogyne incognita
,
Caenorhabditis remanei
,
Samia cynthia ricini
,
Lumbricus rubellus
,
Cavia porcellus
,
Drosophila mojavensis
,
Danaus plexippus
,
Bos indicus
,
Rhipicephalus appendiculatus
,
Cochliomyia hominivorax
,
Rutilus rutilus
,
Anopheles stephensi
,
Diabrotica virgifera virgifera
,
Meleagris gallopavo
,
Trichinella pseudospiralis
,
Tubifex tubifex
,
Haematobia irritans irritans
,
Eriocheir sinensis
,
Papilio xuthus
,
Onychiurus arcticus
,
Lonchura striata domestica
,
Poecilia reticulata
,
Rhodnius prolixus
,
Carcinus maenas
,
Bos sp.
,
Polypedilum vanderplanki
,
Onchocerca volvulus
,
Ostrinia nubilalis
,
Lernaeocera branchialis
,
Macropus eugenii
,
Caligus clemensi
,
Peromyscus polionotus subgriseus
,
Nippostrongylus brasiliensis
,
Laupala kohalensis
,
Oncorhynchus tshawytscha
,
Frankliniella occidentalis
,
Capra hircus
,
Daphnia magna
,
Paralichthys olivaceus
,
Psetta maxima
,
Gammarus pulex
,
Trichoplusia ni
,
Meloidogyne chitwoodi
,
Pan troglodytes verus
,
Spadella cephaloptera
,
Globodera rostochiensis
,
Lymnaea stagnalis
,
Lates calcarifer
,
Calanus finmarchicus
,
Strongyloides stercoralis
,
Oncorhynchus nerka
,
Gryllus bimaculatus
,
Sebastes rastrelliger
,
Drosophila yakuba
,
Thymallus thymallus
,
Ancylostoma ceylanicum
,
Solea senegalensis
,
Epiphyas postvittana
,
Callinectes sapidus
,
Peripatopsis sedgwicki
,
Fenneropenaeus chinensis
,
Coregonus clupeaformis
,
Torpedo californica
,
Thunnus thynnus
,
Cynoglossus semilaevis
,
Salvelinus fontinalis
,
Schmidtea mediterranea
,
Apis mellifera
,
Tribolium castaneum
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST007695
species:
Trichosurus vulpecula
miRNA family:
mir-1908
source:
miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula
Trichosurus
Phalangeridae
Diprotodontia
Metatheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTGTGGGGAAGGCGATTGGTT
miRNA*
CCACATGTTTCTCTCTCACATGC
mismatches:
4
bulges:
2
View larger
pre-miRNA
AAAGGAAGGCT
CTGTGGGGAAGGCGATTGGTT
GGTGAG
CCACATGTTTCTCTCTCACATGC
TGGGTAAA
dot-bracket secondary structure
.......(((.
.(((((((.(((((..(((((
....))
)))..)))))...))))))).))
).......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record