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Species belonging to selected taxon:

Brachypodium distachyon



ABOUT THIS RECORD

ID: MNEST003031
species: Brachypodium distachyon
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATGGGACGGAGGGGGTACAA

miRNA*
ATGCTCTTTCCGTCCCATGTT

mismatches: 3
bulges: 0

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pre-miRNA
TACACGGCTAAAAGCCTAATACATGCTCTTTCCGTCCCATGTTAAGTGACTTTCTGTTACATGTATCTTAACGTTTTTAAGGCATAAATACATTCATATT
TGGTCAAATTTGAGTCATGGGACGGAGGGGGTACAACAAAGTGTAAAAGCATTTT


dot-bracket secondary structure
.....((((...)))).......((((((((((((((((((..((.(((((.........(((((((((((.....))))))......))))).......
.)))))..)).....))))))))))))))))))....(((((((....)))))))



SIMILARITIES
miRBase bdi-MIR1127: 0.000002

PMRD bdi-miR1127: 0.000002

microPC no hits
UniProt no hits

RFAM MIR1122: 2e-16
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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