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Species belonging to selected taxon:
Brachypodium distachyon
ABOUT THIS RECORD
ID:
MNEST003067
species:
Brachypodium distachyon
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTCCCTCCGTCCCATAATTA
miRNA*
ATTATGGAACGGAGGAGTAA
mismatches:
2
bulges:
1
View larger
pre-miRNA
GTTGGAGCTCTTGTAATTTGAATGT
ACTCCCTCCGTCCCATAATTA
CCGTCGAAATATTACATGTATCTAGACGCTTTTCAGGAATAGATACATCCATTT
TGGGGCAAATTTGAGACAAGA
ATTATGGAACGGAGGAGTAA
CATTTAGTGTATATGCTACTAG
dot-bracket secondary structure
..((((((...((((..((((((((
(((((.(((((.((((((((.
..(((..((..((..(((((((((....((.....))..)))))))))((....
..))..))..))..)))...)
))))))).)))))))))).)
)))))))..)))).))).))).
SIMILARITIES
miRBase
bdi-MIR1135
:
0.0000000000001
PMRD
bdi-miR1135
:
0.0000000000001
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 4e-36
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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