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Species belonging to selected taxon:
Branchiostoma floridae
ABOUT THIS RECORD
ID:
MNEST024645
species:
Branchiostoma floridae
miRNA family:
mir-7
source:
miRBase, original name:
bfl-mir-7
(
MI0010009
)
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAAGACTAGTGATTTTGTTGT
miRNA*
AGTAAATCACAGTCTTCCTTA
mismatches:
3
bulges:
2
View larger
pre-miRNA
GTGTTCTGTA
TGGAAGACTAGTGATTTTGTTGT
TGTGTGTCTTGCAAACAAC
AGTAAATCACAGTCTTCCTTA
CGGTGCATC
dot-bracket secondary structure
((((.(((((
.((((((((.(((((((...(((
(((.((.....)).)))))
)..))))))))))))))).))
))).)))).
SIMILARITIES
miRBase
tgu-mir-7-4
:
0.0000000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-7: 4e-40
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"