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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST046252
species:
Brassica rapa
miRNA family:
MIR157
source:
microPC, original name:
miR157
Taxonomy by NCBI:
Brassica rapa
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGATAGAGAGCAC
miRNA*
GCTCTCTATACTTCTGTCAA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TTGACAGAAGATAGAGAGCAC
TAAGGATGACATGCAAGTACATACATATATATCATCACACCGCAAGTGGATATAAGGAAATTCAAGAAAGAGAGGAAAA
AAGAGCCTGCATCTCTACTCTTTTGT
GCTCTCTATACTTCTGTCAA
dot-bracket secondary structure
.((((((((((((((((((((
.(((((.((.(((((.((.(.......((((((..(((.......)))))))))......(((......))).......
..).)).))))).))...))))).))
))))))))).))))))))).
SIMILARITIES
miRBase
bna-MIR156c
:
3e-36
PMRD
bna-miR156c
:
3e-36
microPC
miR157
:
4e-78
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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