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Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST003183
species: Arabidopsis thaliana
miRNA family: MIRf1261
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACCATCAATTCATCGTGGCCG

miRNA*
 GCCATGATAAGCTTTGTGGATGT

mismatches: 2
bulges: 2
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pre-miRNA
 TTTTCCATAGCACCATCAATTCATCGTGGCCGATGTGCTTAGGACGGCCATGATAAGCTTTGTGGATGTAGTAC

dot-bracket secondary structure
.........(((((((.((((.((((((((((............)))))))))).)).)).)))).))).....


SIMILARITIES
miRBase ath-MIR835: 0.0002

PMRD ath-miRf10707-akr: 0.0002

microPC no hits		UniProt sp|Q9C9Z5|NDUA1_ARATH: 0.00004

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
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