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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Raphanus raphanistrum
,
Raphanus raphanistrum subsp. landra
,
Raphanus raphanistrum subsp. maritimus
,
Raphanus sativus
,
Raphanus sativus var. oleiformis
,
Thellungiella halophila
,
Arabidopsis thaliana
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST000278
species:
Brassica napus
miRNA family:
MIR167
source:
miRNEST
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGATCATGTGGCAGTTTCACC
miRNA*
TGAAGCTGCCAGCATGATCTTA
mismatches:
2
bulges:
1
View larger
pre-miRNA
AGAGGCGCACCAGCATCTGA
TGAAGCTGCCAGCATGATCTTA
ACTTCTCTCTCTATATATTATATATGTAGATTTGATCAGGGAAGATC
AGATCATGTGG
CAGTTTCACC
CGTTGATGGTTGCATCA
dot-bracket secondary structure
.((.(((.((((.((.....
(((((((((((.((((((((..
.(((((((.(((((((((...))))))))).......)))))))...
)))))))))))
))))))))..
...)).))))))).)).
SIMILARITIES
miRBase
bra-MIR167d
:
0.000000000007
PMRD
bra-miR167d
:
0.000000000007
microPC
miR167
:
4e-44
UniProt
no hits
RFAM
MIR167_1: 0.0000000005
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record