miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Arabidopsis thaliana, Brassica oleracea

ABOUT THIS RECORD

ID: MNEST044881
species: Brassica napus
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGAAGCTGCCAGCATGATCTG

miRNA*
GATCATCCTGCGGCTTCA

mismatches: 2
bulges: 1

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pre-miRNA
TGAAGCTGCCAGCATGATCTGATAGTGGTACCAGATCATCCTGCGGCTTCA

dot-bracket secondary structure
.((((((((.((.((((((((..........)))))))).)))))))))).

UniProt no hits

RFAM MIR167_1: 0.00004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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