miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Arabidopsis thaliana, Brassica oleracea

ABOUT THIS RECORD

ID: MNEST046170
species: Brassica napus
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGAAGCTGCCAGCATGATCTT

miRNA*
GATCATGTGGCAGTTTC

mismatches: 2
bulges: 1

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pre-miRNA
TGAAGCTGCCAGCATGATCTTAACTTCTCTCTCTATATATTATATATGTAGATTTGATCAGGGAAGATCAGATCATGTGGCAGTTTC

dot-bracket secondary structure
.((((((((((.((((((((...(((((((.(((((((((...))))))))).......)))))))...))))))))))))))))))

UniProt no hits

RFAM MIR167_1: 0.00000008

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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