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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Raphanus raphanistrum
,
Raphanus raphanistrum subsp. landra
,
Raphanus raphanistrum subsp. maritimus
,
Raphanus sativus
,
Raphanus sativus var. oleiformis
,
Thellungiella halophila
,
Arabidopsis thaliana
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST002391
species:
Raphanus sativus
miRNA family:
MIRf1281
source:
miRNEST
Taxonomy by NCBI:
Raphanus sativus
Raphanus
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTGTTTGGTTGCTGAGAAAG
miRNA*
TTCTCGGTGACCAGATTCTGATT
mismatches:
1
bulges:
2
View larger
pre-miRNA
TTCTTTTCATT
TCTGTTTGGTTGCTGAGAAAG
CGAGGGAAATTCTCTGAAATTTTCTGTTTTCTTTTTCT
TTCTCGGTGACCAGATTCTGATT
TTTTAC
dot-bracket secondary structure
...........
((.((((((((((((((((((
.((((((((......(((...)))...)))))))).))
))))))))))))))))...))..
......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record