miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Limnanthes alba, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Tropaeolum majus, Carica papaya, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST000284
species: Brassica napus
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTG

miRNA*
 GATCATCCTGCGGCTTCATT

mismatches: 1
bulges: 1
View larger
pre-miRNA
 TCTATGTTGGTTTTGGGAGGCTGAAGCTGCCAGCATGATCTGTGTATAGATAGTGGTACCAGATCATCCTGCGGCTTCATTCACTCAAATCACCAACAA

dot-bracket secondary structure
....(((((((((((((.((.(((((((((.((.((((((((.((((........)))))))))))).))))))))))).)).))))))..))))))).


SIMILARITIES
miRBase aly-MIR167d: 0.00000000008

PMRD osa-miR167i: 0.00000008

microPC miR167: 0.00000000002		UniProt no hits

RFAM MIR167_1: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;