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Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Limnanthes alba, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Tropaeolum majus, Carica papaya, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST000333
species: Brassica rapa
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Brassica rapa Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCTTCCTCTTCCTCTTCCT

miRNA*
 GAAGAAGAAGAGTGAAGAGTGAA

mismatches: 2
bulges: 2
View larger
pre-miRNA
 GGACAGAAGAAGAAGAAGAGTGAAGAGTGAAGCTCCTCCTCTCGAACAACAACAATGGCGACAATGGCTGCAATCGGATCCTTAAAAGTCCCTTCCTCTT
CCTCTTCCTCTTCCTCGAACCACA

dot-bracket secondary structure
((...((.(((((.((((((.((((((.(((((.((.....(((..((.......)).)))....))..))....((((........)))).))))))))
))))))).))))).))...))...


SIMILARITIES
miRBase mtr-MIR2673b: 0.000006

PMRD no hits

microPC no hits		UniProt no hits

RFAM 7SK: 0.000007		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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