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Species belonging to selected taxon:

Canis lupus familiaris



ABOUT THIS RECORD

ID: MNEST006918
species: Canis lupus familiaris
miRNA family: miR-3195
source: miRNEST

Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGCGCCGGGCCCGGGTCTTCC

miRNA*
AAGACCCACTCCCCGGCGCCGCT

mismatches: 3
bulges: 2

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pre-miRNA
AGGGGGCGNACGGAAGACCCACTCCCCGGCGCCGCTCGNGGGGGGCCCAAGNCCTTGTGGGGGGGGCCCAGCTTTTTTTTGGTGTGAGGCCGGAAGCGGC
CCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGTCGGG


dot-bracket secondary structure
....(((....(((((((((....((((((((.((.((.(((((((((....(((....))).)))))).(((..((((((((.....)))))))).)))
)))))))))))))))...)))))))))....)))...



SIMILARITIES
miRBase mmu-mir-2182: 0.0000000004

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 2e-22
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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