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Species belonging to selected taxon:

Canis lupus familiaris



ABOUT THIS RECORD

ID: MNEST006942
species: Canis lupus familiaris
miRNA family: miR-133a
source: miRNEST

Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGGTAAAATGGAACCAAAT

miRNA*
TTGGTCCCCTTCAACCAGCTG

mismatches: 4
bulges: 0

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pre-miRNA
CAAACTAGCAGCACTGCAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCAT
TGATTACTACAGGACAG


dot-bracket secondary structure
................((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))))
))...............



SIMILARITIES
miRBase rno-mir-3582: 6e-46

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-133: 3e-26
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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