miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Capsicum annuum



ABOUT THIS RECORD

ID: MNEST002891
species: Capsicum annuum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Capsicum annuum Capsicum Capsiceae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTGCTTCATCATCATCGTCG

miRNA*
GTGGTGGTGGTGGAGGCATCAT

mismatches: 5
bulges: 1

View larger
pre-miRNA
AAGGTCTGCCAATTGCTTCATCATCATCGTCGTCATCCCCATATTCCATTAGCTGGACTAAAGTATCCGGAACAGTTTCACATGGAGCTTTATTAACCAC
ATTGTTGTCATGCACTTTCTGTGAGGATGATTGGAACTTTGGTGGTGGTGGTGGTGGTGGAGGCATCATTCTAGGAG


dot-bracket secondary structure
....(((......((((((((((((((((...(((((.(((((.((((.....)))).))((((.(((((..((.(((((((.((.((.....((((...
...))))....)).))...))))))).)).)))))))))))).))))))))))))))).))))))........))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;