miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002927
species: Centaurea maculosa
miRNA family: MIRf730
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACGAGCCGAGCTTGAGCTCGT

miRNA*
GAGCTCGAGCTTTGTTATTTA

mismatches: 4
bulges: 0

View larger
pre-miRNA
GAGCTTGATTTTGCTTTTAGACGAGCTCGAGCTTTGTTATTTAACGAGCCGAGCTTGAGCTCGTTTAGGCTTGTCGAACACTC

dot-bracket secondary structure
(((.(((((...(((..(((((((((((((((((.(((........))).))))))))))))))))))))..)))))...)))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;