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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002938
species: Centaurea maculosa
miRNA family: MIRf144
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATGGCGTATGAGGAGCCTAG

miRNA*
TGGCTCCATGTATGACATTTT

mismatches: 4
bulges: 0

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pre-miRNA
AGATACATACACGATGAGTGCAAGTATATGCCTGGCTCCATGTATGACATTTTCAGAGACCATCGGTATTTCCAATGGCCTCCGTGAATGGCGTATGAGG
AGCCTAG
CATATTCCACATCTTGTACGTTCTACAAC


dot-bracket secondary structure
.....(((.....))).(((((((.((((((..((((((.((((((.(((((...(((.((((.((.....)).)))).)))...))))).)))))).))
))))..)
))))).......)))))))..........



SIMILARITIES
miRBase ptc-MIR160c: 0.000000000002

PMRD ptc-miR160c: 0.000000000002

microPC miR160: 1e-28
UniProt no hits

RFAM mir-160: 0.0000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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