miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Carica papaya
ABOUT THIS RECORD
ID:
MNEST046582
species:
Carica papaya
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Carica papaya
Carica
Caricaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGCTATCCCTCCTGAGTTTC
miRNA*
AGCTCAGGAGGGATAGCGCC
mismatches:
1
bulges:
0
View larger
pre-miRNA
A
AGCTCAGGAGGGATAGCGCC
ATGGCGGGTCTTGAATCTTGATCTTCATTTG
CGCTATCCCTCCTGAGTTTC
dot-bracket secondary structure
(
(((((((((((((((((((.
((((.(((((.........)))))))))..)
))))))))))))))))))).
SIMILARITIES
miRBase
ath-MIR390b
:
0.00000005
PMRD
ath-miR390b
:
0.00000005
microPC
miR390
:
5e-33
UniProt
no hits
RFAM
MIR390: 8e-32
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record