miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carica papaya



ABOUT THIS RECORD

ID: MNEST002870
species: Carica papaya
miRNA family: MIRf1504
source: miRNEST

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTGCATGCATGCATGCTATT

miRNA*
CAGAACTGCATAGCATGCCATGG

mismatches: 4
bulges: 2

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pre-miRNA
AGAGGCGGGATATTGCATGCATGCATGCTATTAATTTATACAGGACAGAACTGCATAGCATGCCATGGGGATATTT

dot-bracket secondary structure
..........(((.(((((((((((..((.((...........)).))...))))).)))))).))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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