miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Beta vulgaris, Mesembryanthemum crystallinum, Tamarix hispida



ABOUT THIS RECORD

ID: MNEST000218
species: Beta vulgaris
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Beta vulgaris Beta Amaranthaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCT

miRNA*
AGTGGCGGTGGTGGTGGTGGTG

mismatches: 2
bulges: 0

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pre-miRNA
TTCAATGGCACAACTCCGTTACTCTCCTTTATCATCATCATCATCATCATCTCGTCAATTTTCTCTCTCCTCCATTAATCGGATTAATTCAATCTCATTC
CCTCTGAATCAATCTTTGAATCTCCAATCAAAATCCGCCACGTCAGATCATCTCCTTCACCTTTGCTTCTCCTCCAACAATGGCGGAAATGGCGGCGCAG
GATCCATCGGCGGAAGTGGCGGTGGTGGTGGTGGTGGTTGGAGTGGTGGAGATTCATCGGAAAA


dot-bracket secondary structure
(((.((((.....((((((((((((...(((((((((((((((((.((((.(((((.((..(((....((.(((((....(((((.(((((.........
....))))).)))))((((........))))..(((((((........................................)))))))))))).))....)
))...)).)))))..)))).)))))))))))))))))..))))))))))))..)))).)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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