miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST009148
species: Pongo abelii
miRNA family: mir-1273
source: miRNEST

Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGGCAACACAGCAAGACTCTG

miRNA*
 GAGTCTTGCGGTGAGCCGAG

mismatches: 3
bulges: 1
View larger
pre-miRNA
 GGACATGTTTTTTTTTTTTTTATTTTTTTGAGACAGAGTCTTGCGGTGAGCCGAGATGGCGCCATTGCACTCCAGTCTGGGCAACACAGCAAGACTCTGT
CTCAAAAAAAAAAAAAAAAAAAAAAAACATTGAAAGAA

dot-bracket secondary structure
....(((((((((((((((((.((((((((((((((((((((((.(((.(((.((((.((......))......)))).)))..))).))))))))))))
))))))))))...)))))))))))))))))........


SIMILARITIES
miRBase hsa-mir-1273: 0.0000000004

PMRD no hits

microPC no hits		UniProt no hits

RFAM Metazoa_SRP: 1e-16		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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