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Species belonging to selected taxon:

Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002932
species: Centaurea maculosa
miRNA family: MIR162
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCAG

miRNA*
GGAGTCAGCGGTTCATCGATC

mismatches: 4
bulges: 0

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pre-miRNA
TGTGCGTTTGGTGGAGTTCATTGGAGTCAGCGGTTCATCGATCAGTTCCTTTAACGAGCATATGAACAAGAGAGAGTGTAAAAGAGGAATCGATCGATAA
ACCTCTGCATCCAG
TGTCCACCCCTACCTGCCT


dot-bracket secondary structure
.(((.((..((((((...(((((((..(((.((((.(((((((.((((((((.....((((..............))))...)))))))).))))))).)
))).)))..)))))
))))))))...)).)))..



SIMILARITIES
miRBase osa-MIR162a: 0.0000000004

PMRD osa-miR162a: 0.0000000004

microPC miR162: 5e-22
UniProt no hits

RFAM MIR162_2: 0.000000008
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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