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Species belonging to selected taxon:

Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002936
species: Centaurea maculosa
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTTCTCAGGTCACCCCT

miRNA*
AGTGATACTAAGAACACATG

mismatches: 2
bulges: 2

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pre-miRNA
ACAGAACAGGGCAATTCTCCAAGGAGTGATACTAAGAACACATGTGATGGAATGAGTGCATTGATATGCTGTATGGTACAACTCTTTGATGCACATTTTT
TTTCATTTGTGTTCTCAGGTCACCCCTTTGGAGCACCCTGTTTCATAATGTACAACT


dot-bracket secondary structure
...((((((((.....((((((((.(((((.((.((((((((.((((.((((...(((((((((.....((((...)))).....)))))))))...)))
).)))).)))))))).)))))))..))))))))..))))))))..............



SIMILARITIES
miRBase vvi-MIR398a: 0.000000008

PMRD vvi-miR398a: 0.000000008

microPC miR398: 1e-41
UniProt no hits

RFAM MIR398: 0.0000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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