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Species belonging to selected taxon:

Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST046263
species: Centaurea solstitialis
miRNA family: MIR159
source: microPC, original name: miR159

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTA

miRNA*
GAGCTCCTTGAAGTCCAATAG

mismatches: 3
bulges: 0

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pre-miRNA
TAGAGCTCCTTGAAGTCCAATAGAGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAAGTCCTATCTTTATGGTTTTGTATAGGCTTTG
TGGCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTTTTTGGATTGAAGGGAGCTCTA


dot-bracket secondary structure
(((((((((((..(((((((.((((((((.(((((((..(((((.(((.((((.(((((.(..((.((((.((((((...........).))))).))))
.))..).))))).)))).))).)))))..)))))))...)))))))).)))))))..)))))))))))



SIMILARITIES
miRBase vvi-MIR159c: 0.00000000004

PMRD vvi-miR159c: 0.00000000004

microPC miR159: 8e-80
UniProt no hits

RFAM MIR159: 0.0000000007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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