miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sus scrofa, Bos taurus, Ovis aries, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST009642
species: Bos indicus
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Bos indicus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAAAACCGCAATTACTTTTGC

miRNA*
GAAAGTAATCGCGGTTCTCAC

mismatches: 4
bulges: 0

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pre-miRNA
TACACTGGTGTGAAAGTAATCGCGGTTCTCACCATTACCTTTAGTGGCAAAAACCGCAATTACTTTTGCACAACCTA

dot-bracket secondary structure
.......(((((((((((((.((((((....((((((....))))))....)))))).)))))))))))))......


SIMILARITIES
miRBase hsa-mir-548o-2: 0.00000000006

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-548: 0.0000000000003
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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