ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: mir-750
source: miRBase, original name: isc-mir-750 (MI0012284)
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCAGATCTAACTCTTCCAGCTCA miRNA* AGTTGGAAGTGGGA mismatches: 1 bulges: 9 |
pre-miRNA
GGTTGGCCGTCCCACTCGAGTTGGAAGTGGGATCCTGACACTTGAGCGCTGTCGGTGGTGCCAGATCTAACTCTTCCAGCTCAGGTGAGGTACCGGTATT
T
dot-bracket secondary structure
.....((((.(((((..(((((((((((((.((((((((((......).)))))).))).))).........))))))))))..))).))...))))...
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
GGTTGGCCGTCCCACTCGAGTTGGAAGTGGGATCCTGACACTTGAGCGCTGTCGGTGGTGCCAGATCTAACTCTTCCAGCTCAGGTGAGGTACCGGTATT
T
dot-bracket secondary structure
.....((((.(((((..(((((((((((((.((((((((((......).)))))).))).))).........))))))))))..))).))...))))...
.
SIMILARITIES| miRBase cte-mir-750: 0.00000008 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"
