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Species belonging to selected taxon:
Volvox carteri
,
Chlamydomonas reinhardtii
ABOUT THIS RECORD
ID:
MNEST048452
species:
Chlamydomonas reinhardtii
source:
PMRD, original name:
cre-miR1152
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAGAAGGTGCGCTGTCTTGA
miRNA*
AAGACGGCGCACCTTCTTAAC
mismatches:
0
bulges:
0
View larger
pre-miRNA
GGGGGTATTCACGGCACCGTC
AAGACGGCGCACCTTCTTAAC
GTCCTTCGGTGCTTGCTTGCACACACTCAAGCAGGCACCGAAGGGCGT
TAAGAAGGTG
CGCTGTCTTGA
CGGTGCCGTGAATACCTTC
dot-bracket secondary structure
(((((((((((((((((((((
(((((((((((((((((((((
(((((((((((((((((((........)))))))))))))))))))))
))))))))))
)))))))))))
)))))))))))))))))))
SIMILARITIES
miRBase
cre-MIR1152
:
9e-70
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
cre-MIR1152
from miRBase (
MNEST039341
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC,
Nature. 447:1126-1129(2007).
,
"miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"