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Species belonging to selected taxon:
Chlamydomonas reinhardtii
ABOUT THIS RECORD
ID:
MNEST039325
species:
Chlamydomonas reinhardtii
miRNA family:
MIR1144
source:
miRBase, original name:
cre-MIR1144a
(
MI0006205
)
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGGCAGCGCGGGGCTGCTGG
miRNA*
GGTCCTGTGCTGCCCGTT
mismatches:
1
bulges:
3
View larger
pre-miRNA
CGGCGGCGTTGGACTGCTGGGGTGCAGCAGGCTTGGAACCGGGCACGCAGGAGGTGGGTTTTGTGGCGGCAGGNAG
CAGGCAGCGCGGGGCTGCTGG
TGG
TGGTGGAGGAGGATGAAGTTCGCCATTCAAACAACCCTTTCTGCACC
GGTCCTGTGCTGCCCGTT
GCCTGCAGGAGCAAAACACACCCACTCCGTGTCCG
GCTCCAAGATTGCTGAACCCCTGTCGCTGGCTGCTGCCG
dot-bracket secondary structure
(((((((((..(.(.((.(((((.((((((.((((((.(((((((((.((..((((.(((((((....(((((.((
(.((((((((((((((...((
(.(
..(.(((((.(..((((........))))..)...))))))..))))
)))))))))))))).)))
.)))))....))))))).))))..)).))))))))
).)))))).)))))).))))).)).))..)).)))))))
SIMILARITIES
miRBase
cre-MIR1144a
:
1e-132
PMRD
cre-miR1144b
:
3e-28
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
additional data
download this record
evidence:
cloned
references
[
1
] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC,
Nature. 447:1126-1129(2007).
,
"miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"