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Species belonging to selected taxon:
Volvox carteri
,
Chlamydomonas reinhardtii
ABOUT THIS RECORD
ID:
MNEST039329
species:
Chlamydomonas reinhardtii
source:
miRBase, original name:
cre-MIR1146
(
MI0006207
)
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGGGTCCGATCGGGAAGCT
miRNA*
CTTCCCACATGGGGCCCA
mismatches:
3
bulges:
1
View larger
pre-miRNA
ATGGGTCCGATCGGGAAGCT
TTATCACACTCGGCGTATGAACAACAAG
CTTCCCACATGGGGCCCA
dot-bracket secondary structure
.(((((((.((.((((((((
(..(((.((.....)).))).....)))
))))))..)).)))))))
SIMILARITIES
miRBase
no hits
PMRD
cre-miR1146
:
6e-32
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
cre-miR1146
from PMRD (
MNEST048447
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC,
Nature. 447:1126-1129(2007).
,
"miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"