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Species belonging to selected taxon:
Botryococcus braunii
,
Coccomyxa sp. C-169
,
Volvox carteri
,
Chlamydomonas reinhardtii
ABOUT THIS RECORD
ID:
MNEST002827
species:
Volvox carteri
miRNA family:
MIRf160
source:
miRNEST
Taxonomy by NCBI:
Volvox carteri
Volvox
Volvocaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTGCAGCAGCAGCAGCTGCAG
miRNA*
GCAGCAGCAGCAGCAGCAGCA
mismatches:
5
bulges:
0
View larger
pre-miRNA
TCATGCCGTGCCCATGGCCGTGTAACTGCCTGGGATTCTGGCCGCGTGCTCTG
GCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAG
CTGCAGCAGCAGC
AGCTGCAG
CCCCCTGCCTTTGCGACTGTGGTTGTTGTGTCTGTGGTAGTGGTTGCGGCGCCCAGGGC
dot-bracket secondary structure
.........((((...((((((..((((((..((((..(((((((.(((...(
((((..((.(((((.((.((.
((.(((((....)
)))).)).)).))
.))))).)
)...)))))...)))...)))))))....))))..))))))...)))))).....))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record