miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Botryococcus braunii, Coccomyxa sp. C-169, Volvox carteri, Chlamydomonas reinhardtii



ABOUT THIS RECORD

ID: MNEST002827
species: Volvox carteri
miRNA family: MIRf160
source: miRNEST

Taxonomy by NCBI:
Volvox carteri Volvox Volvocaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGCAGCAGCAGCAGCTGCAG

miRNA*
GCAGCAGCAGCAGCAGCAGCA

mismatches: 5
bulges: 0

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pre-miRNA
TCATGCCGTGCCCATGGCCGTGTAACTGCCTGGGATTCTGGCCGCGTGCTCTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCAGCAGCAGC
AGCTGCAG
CCCCCTGCCTTTGCGACTGTGGTTGTTGTGTCTGTGGTAGTGGTTGCGGCGCCCAGGGC


dot-bracket secondary structure
.........((((...((((((..((((((..((((..(((((((.(((...(((((..((.(((((.((.((.((.(((((....))))).)).)).))
.))))).)
)...)))))...)))...)))))))....))))..))))))...)))))).....))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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