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Species belonging to selected taxon:
Cichorium intybus
,
Cichorium endivia
ABOUT THIS RECORD
ID:
MNEST000337
species:
Cichorium intybus
miRNA family:
MIRf519
source:
miRNEST
Taxonomy by NCBI:
Cichorium intybus
Cichorium
Cichoriinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCATAGCATCATGAGCAATCA
miRNA*
ACTGCTAATGATGTTATCTCAT
mismatches:
3
bulges:
1
View larger
pre-miRNA
TATGTAAACCACCAAGAACAT
GCATAGCATCATGAGCAATCA
GCCTTGGAAATATTTTTGAGCAAGTG
ACTGCTAATGATGTTATCTCAT
TTCTTGATGG
CTCTTCTT
dot-bracket secondary structure
........(((.((((((.((
(.((((((((((.((((.(((
..(((((((....)))))))....))
).)))).))))))))))..)))
)))))).)))
........
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf11142-akr
:
0.000000001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record