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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST003134
species: Citrus clementina
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTT

miRNA*
GCTCAAGAAAGCTGTGGGAGA

mismatches: 1
bulges: 0

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pre-miRNA
AAGTCCTGGTCATGCTTTTCCACAGCTTTCTTGAACTTCCACTGTTTGCTGATTAATACACGGCTCTTGCTAGCTAGGCGCCGTATGTAGACACCGCGCG
CCATGGGAGCTCAAGAAAGCTGTGGGAGAACATGGCACACCTT


dot-bracket secondary structure
........((((((.(((((((((((((((((((.((((((..((.(((((.((.(((.(((((.((((.....)))).))))).))).))))..))).)
)..)))))).))))))))))))))))))).)))))).......



SIMILARITIES
miRBase ccl-MIR396: 2e-77

PMRD gma-miR396b: 0.000000000000002

microPC miR396: 9e-58
UniProt no hits

RFAM MIR396: 0.000000000002
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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