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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000368
species: Citrus reticulata
miRNA family: miR3952
source: miRNEST

Taxonomy by NCBI:
Citrus reticulata Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGGGCCTTTCTAGAGCAC

miRNA*
GCTGTAGAGTGTCCCTTCACC

mismatches: 4
bulges: 0

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pre-miRNA
ACTTATGCATATTCTTTCCTGTGCTGTAGAGTGTCCCTTCACCCTCGGAAACGTCACCATGGACTGGAACTGGGAGCGAAGAAAGTGAGATCTGATGGTT
GGCGTTGAACGTGGCCAGCTGCATAACAGAGATGGTGTTTTCATAGTTGAAGGGCCTTTCTAGAGCACTGGAATCCATTCGTAATTA


dot-bracket secondary structure
..(((((.((.....((((.(((((.(((((...(((((((..((..((((...((((((...((...(((............))).)).((((.(((((
(((..........)))))))).....)))).)))))).))))..)).)))))))...))))).))))).))))...)).)))))...



SIMILARITIES
miRBase csi-MIR3952: 3e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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