miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000392
species: Citrus sinensis
miRNA family: MIR1448
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTCCCACACCTCCCATCCC

miRNA*
GATGGGTGAGTTGGGAAAATA

mismatches: 3
bulges: 2

View larger
pre-miRNA
GGGAAGAAGACTGGACTGGGGGAAGTCTTGGAGATGGGTGAGTTGGGAAAATAATAACTTTCTTCACGAAAGAAAGCAATTTTTTTCCCACACCTCCCAT
CCC
TAAGATTTTCTTCAGTTCCTTCCTCTCTT


dot-bracket secondary structure
((((.((((...(((((((((((((((((((.((((((...((((((((((.(((..(((((((.....)))))))..))).)))))))).))..)))))
).)
)))))))))))))))))))))).))))..



SIMILARITIES
miRBase csi-MIR472: 2e-33

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;