miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000394
species: Citrus sinensis
miRNA family: MIR869
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GATGGTTCAATGCTGGCGTTA

miRNA*
GCCCAACATTGAACCACGG

mismatches: 2
bulges: 2

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pre-miRNA
TAGAATGTGATGGAAACGGAGAGCCCAACATTGAACCACGGTACAAGGATTTTTTCTCAATTTTTTTTTTTTTTGATGGTTCAATGCTGGCGTTATTGTT
CGTCANGATTTGGT


dot-bracket secondary structure
..((((.((((((..((((..((((((.(((((((((((((...(((((((.......))))))).......))).)))))))))).))).))).)))))
)))))..))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record





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