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Species belonging to selected taxon:
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Citrus clementina
ABOUT THIS RECORD
ID:
MNEST046597
species:
Citrus sinensis
miRNA family:
MIR162
source:
microPC, original name:
miR162
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA
miRNA*
GAGGCAGCGGTTCATCGATC
mismatches:
4
bulges:
0
View larger
pre-miRNA
TG
GAGGCAGCGGTTCATCGATC
ACTTTGTGCAAATTTTGTTGTGAAAAATAACACAAAATACATGAATCGA
TCGATAAACCTCTGCATCCA
dot-bracket secondary structure
.(
((.((((.((((.(((((((
..((..((...(((((((.((........))))))))).))..))..))
))))).)))).)))).))).
SIMILARITIES
miRBase
csi-MIR162
:
1e-46
PMRD
ghr-miR162a
:
8e-23
microPC
miR162
:
1e-46
UniProt
no hits
RFAM
MIR162_2: 0.000000000000005
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record