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Species belonging to selected taxon:
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Citrus clementina
ABOUT THIS RECORD
ID:
MNEST046796
species:
Citrus sinensis
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCTCAGGAGGGATAGCGCC
miRNA*
CGCTATCCATCCTGAGTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
AGCTCAGGAGGGATAGCGCC
ATGGGTGCCATGAATATGGGAATGATCTAGGGTTTCATGATAAATAATGGGCACTGG
CGCTATCCATCCTGAGTT
dot-bracket secondary structure
(((((((((.((((((((((
(...(((((............((((.........))))...........))))))))
)))))))).)))))))))
SIMILARITIES
miRBase
csi-MIR390
:
5e-49
PMRD
ghr-miR390c
:
0.000001
microPC
miR390
:
5e-49
UniProt
no hits
RFAM
MIR390: 0.00002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record