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Species belonging to selected taxon:

Daphnia pulex, Daphnia magna



ABOUT THIS RECORD

ID: MNEST035019
species: Daphnia pulex
miRNA family: mir-263
source: miRBase, original name: dpu-mir-263a (MI0012230)

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATGGCACTGGAAGAATTCAC

miRNA*


mismatches: 6
bulges: 95

View larger
pre-miRNA
GTTGTTGGCCGATTCCCGCAATGGCACTGGAAGAATTCACGGGTCGCAATTAAATTTGACAGATTTGAATTTCTGGAAAATGACACACTCGTGGATCTTC
A


dot-bracket secondary structure
((..(((..((.....)))))..))....(((((.(((((((((.........((((..((((........))))..)))).....))))))))))))))
.



SIMILARITIES
miRBase bmo-mir-263a: 0.00000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-263: 0.0000004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record

references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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