miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helobdella robusta, Lumbricus rubellus, Tubifex tubifex



ABOUT THIS RECORD

ID: MNEST009674
species: Tubifex tubifex
miRNA family: miR-4213
source: miRNEST

Taxonomy by NCBI:
Tubifex tubifex Tubifex Tubificidae Tubificina Haplotaxida Oligochaeta Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATATTTTCAACGATTTTTTT

miRNA*
AAGAAACGAAGAAAAAATTTA

mismatches: 4
bulges: 0

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pre-miRNA
TAAACACACTAAATATTTTCAACGATTTTTTTTTTTCAATTTTAGGCTTTTATCCACTGTAAATCCACCGTAATTTAGCTAACACTTTCTACACTGAGGA
GTGTTTTTTAATTTTTTTGGCTTTCAGCAATTTTTCATAAATGTTAAAAAATATTTTGCAAATGCATACATATTGTGAAGAAGAAGAAACGAAGAAAAAA
TTTA
TGATTTGT


dot-bracket secondary structure
.........(((((.(((((..((.(((((((((((((..(((.(((.(((((...(((.(((.(((....((.((((..((((((((.(.....).)))
)))))..)))).))...))).)))))).........))))).))).)))(((((..(((....)))...))))).))))))))))))).))..))))).)
))))
........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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