miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acropora millepora, Hydra vulgaris, Nematostella vectensis, Clytia hemisphaerica, Acropora palmata, Anemonia viridis, Montastraea faveolata, Metridium senile, Porites astreoides, Aiptasia pallida



ABOUT THIS RECORD

ID: MNEST009178
species: Acropora palmata
miRNA family: miR-3580
source: miRNEST

Taxonomy by NCBI:
Acropora palmata Acropora Acroporidae Astrocoeniina Scleractinia Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCTTTTACTTATTCTGGTTG

miRNA*
ACCAGCTGTATGTAGGGTACT

mismatches: 2
bulges: 2

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pre-miRNA
CTTTTGAATGGTGCTTTTACTTATTCTGGTTGCTTAACTATTATAATGATGTAACATCAAGCAATATATTTGTTACTGACCAGCTGTATGTAGGGTACTA
ATTTTTA


dot-bracket secondary structure
.....((.(((((((((.((.(((.(((((((..((((...((((.(((((...))))).....))))...)))).)))))))..))).)))))))))))
.))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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