miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acropora millepora, Hydra vulgaris, Nematostella vectensis, Clytia hemisphaerica, Acropora palmata, Anemonia viridis, Montastraea faveolata, Metridium senile, Porites astreoides, Aiptasia pallida



ABOUT THIS RECORD

ID: MNEST007558
species: Hydra vulgaris
miRNA family: miR-4206
source: miRNEST

Taxonomy by NCBI:
Hydra vulgaris Hydra Hydridae Anthomedusae Hydroida Hydrozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTGAATGGTTTAGTGAGATC

miRNA*
TGCTCAAACTTGATCATTTAGAGG

mismatches: 4
bulges: 2

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pre-miRNA
CGCTACTACCGATTGAATGGTTTAGTGAGATCTCCGGATCGGCGTCAGCGCGACTTCACGGTTGTTGCTGAAGGCCGAGAAGTTGCTCAAACTTGATCAT
TTAGAGG
AAGTAAAA


dot-bracket secondary structure
...((((.((..((((((((((.((((((..((.....(((((.(((((((((((....))))).))))))..)))))..))...)))..))).))))))
)))).))
.))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 1e-59
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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