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Species belonging to selected taxon:

Dendroctonus ponderosae, Diabrotica virgifera virgifera, Tribolium castaneum



ABOUT THIS RECORD

ID: MNEST009923
species: Tribolium castaneum
miRNA family: miR-2754
source: miRNEST

Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGTATTGAGTGTAATAGT

miRNA*
TATTGCAAGTAACACTGACCT

mismatches: 4
bulges: 0

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pre-miRNA
CATGCTTGAAGCTATTGCAAGTAACACTGACCTGGACAAAGATTTGAAGGAGTTTCTGGGACGTTACACTGTTGATGTTGTTGGGTCTTGTGCTTTTGGT
ATTGAGTGTAATAGT
TTCAAGCAC


dot-bracket secondary structure
..(((((((((((((((((..(((.(((((...((...(((((((((.(((...)))..(((((((......))))))).)))))))))...)).)))))
.)))..)))))))))
)))))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9VB31|C6A18_DROME: 0.0001

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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