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Species belonging to selected taxon:

Ipomoea batatas, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST008956
species: Ipomoea nil
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTATAGCATCATGAGCAATCA

miRNA*
ACTGCTCATGATGTTATAGCT

mismatches: 3
bulges: 0

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pre-miRNA
TTATCCGAACATACTAAGAATGTATAGCATCATGAGCAATCAGCCTTGGAATCTTAGCAGATTGACTGCTCATGATGTTATAGCTAATATAATTTCTCTA
GCT


dot-bracket secondary structure
........((((.......)))).((((((((((((((.((((..(((.........))).)))).)))))))))))))).(((((............))
)))



SIMILARITIES
miRBase no hits

PMRD ath-miRf11142-akr: 0.00000000008

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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