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Species belonging to selected taxon:

Taraxacum kok-saghyz, Taraxacum officinale



ABOUT THIS RECORD

ID: MNEST002696
species: Taraxacum kok-saghyz
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTTCTCAGGTCGCCCCTG

miRNA*
GGTGCGCCATGAAAACACATG

mismatches: 2
bulges: 2

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pre-miRNA
ATAATGGCAGAGGTATCCGGCAGGTGCGCCATGAAAACACATGTGAAATGTACAATATACTAGGTCATGTCATGTGTTCTCAGGTCGCCCCTGCAAGATT
TTCCTTTGTCCA


dot-bracket secondary structure
....(((((((((.(((..(((((.(((((.(((.(((((((((((...(((.....)))....)))...)))))))).))))).))).)))))..))).
..)))))).)))



SIMILARITIES
miRBase vvi-MIR398c: 0.0000003

PMRD vvi-miR398c: 0.0000003

microPC miR398: 3e-23
UniProt no hits

RFAM MIR398: 0.000006
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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