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Species belonging to selected taxon:

Hevea brasiliensis, Jatropha curcas, Manihot esculenta



ABOUT THIS RECORD

ID: MNEST001506
species: Manihot esculenta
miRNA family: miR168a
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCCGCCTTGCATCAACTGAAT

miRNA*
TCGCTTGGTGCAGGTCGGGAA

mismatches: 2
bulges: 0

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pre-miRNA
CGGCTGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGATTAGCTTCGCTTGCATATGTACGTATATGTTTTCTCCTTATTATGCTAGATGGCAAGTCTT
GATTGGTTGAGATCGGACAGAAGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAGACCGCG


dot-bracket secondary structure
..((.((((((.(((((.((((((((((.(((((.((((((.(((((.((.(((((((....)))))))..((((...((((....((((.....)))).
...)))).))))..))...))))).)))))).))))).)))))))))).))))).)))))).)).



SIMILARITIES
miRBase tcc-MIR168: 4e-17

PMRD rco-miR168: 0.000000000000009

microPC miR168: 2e-74
UniProt no hits

RFAM MIR168: 4e-17
most similar mature miRNAs

Identical with: miR168 from microPC (MNEST044989)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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