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Species belonging to selected taxon:

Hevea brasiliensis, Jatropha curcas, Manihot esculenta



ABOUT THIS RECORD

ID: MNEST001519
species: Manihot esculenta
miRNA family: MIRf493
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGACCAGGCTTCATTCCCCT

miRNA*
GGGAATGTTGGCTGGCTCTAG

mismatches: 4
bulges: 2

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pre-miRNA
TGAGTAAAAACTCATTAATGGTTGTTTTTGAAGGGAATGTTGGCTGGCTCTAGGCATTCACAAGTGTGGGAGAAGAAATCGATCAGAAGCAGTGGAAGCT
TTGGACCAGGCTTCATTCCCCTCAATATAATTACCATCTTCTTCTTCTTTT


dot-bracket secondary structure
(((((....)))))...(((((.(((.((((.(((((((..((((((.((.((((.(((((..((.(((..((.....))..)))...)).))))).)))
).)).))).))).))))))).))))...))).)))))..............



SIMILARITIES
miRBase vvi-MIR166b: 0.0000000005

PMRD vvi-miR166b: 0.0000000005

microPC miR166: 0.0001
UniProt no hits

RFAM mir-166: 0.0000001
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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